STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL44408.1PFAM: protein of unknown function DUF820; KEGG: tcu:Tcur_4246 protein of unknown function DUF820. (182 aa)    
Predicted Functional Partners:
ADL44942.1
PFAM: protein of unknown function DUF820; KEGG: sgr:SGR_2969 hypothetical protein.
  
     0.748
ADL44409.1
KEGG: stp:Strop_0853 hypothetical protein.
       0.553
ADL44407.1
Lysozyme; PFAM: glycoside hydrolase family 25; KEGG: sgr:SGR_4818 putative lysozyme M1 precursor; SMART: Glycoside hydrolase, family 25 subgroup.
       0.496
ADL47505.1
PFAM: protein of unknown function DUF1205; KEGG: saq:Sare_2033 hypothetical protein.
  
     0.422
ADL44380.1
PFAM: GCN5-related N-acetyltransferase; KEGG: sro:Sros_3946 hypothetical protein.
  
     0.410
ADL44410.1
PFAM: Ketopantoate reductase ApbA/PanE domain protein; KEGG: bcv:Bcav_4029 2-dehydropantoate 2-reductase.
       0.402
ADL46326.1
KEGG: mmi:MMAR_2907 hypothetical protein.
  
     0.401
Your Current Organism:
Micromonospora aurantiaca
NCBI taxonomy Id: 644283
Other names: M. aurantiaca ATCC 27029, Micromonospora aurantiaca ATCC 27029, Micromonospora aurantiaca str. ATCC 27029, Micromonospora aurantiaca strain ATCC 27029
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.