STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL44417.1PFAM: GtrA family protein; KEGG: saq:Sare_0806 GtrA family protein. (178 aa)    
Predicted Functional Partners:
ADL44416.1
PFAM: GtrA family protein; KEGG: saq:Sare_0805 GtrA family protein.
 
    
0.723
ADL48021.1
KEGG: stp:Strop_3252 hypothetical protein.
  
     0.439
ADL49161.1
TIGRFAM: DNA binding domain protein, excisionase family; KEGG: saq:Sare_0413 DNA binding domain-containing protein.
  
    0.432
ADL47980.1
PFAM: protein of unknown function YGGT; KEGG: saq:Sare_3433 hypothetical protein.
  
     0.428
ADL48107.1
KEGG: saq:Sare_3544 hypothetical protein.
  
     0.423
ADL48787.1
KEGG: stp:Strop_3731 hypothetical protein; TIGRFAM: conserved hypothetical protein; PFAM: Protein of unknown function DUF2342.
  
     0.409
ADL47930.1
KEGG: saq:Sare_3392 glutamate synthase (ferredoxin); PFAM: ferredoxin-dependent glutamate synthase; glutamine amidotransferase class-II; glutamate synthase; glutamate synthase alpha subunit domain protein.
     
 0.405
Your Current Organism:
Micromonospora aurantiaca
NCBI taxonomy Id: 644283
Other names: M. aurantiaca ATCC 27029, Micromonospora aurantiaca ATCC 27029, Micromonospora aurantiaca str. ATCC 27029, Micromonospora aurantiaca strain ATCC 27029
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.