STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL44466.1PFAM: Uracil-DNA glycosylase superfamily; KEGG: stp:Strop_0899 uracil-DNA glycosylase superfamily protein. (237 aa)    
Predicted Functional Partners:
ADL45085.1
PFAM: Uracil-DNA glycosylase superfamily; KEGG: gob:Gobs_0834 phage SPO1 DNA polymerase-related protein.
  
  
  0.913
ADL44467.1
KEGG: stp:Strop_0900 hypothetical protein.
       0.888
ADL44469.1
PFAM: ATPase associated with various cellular activities AAA_3; KEGG: saq:Sare_0845 ATPase.
       0.882
ADL44471.1
KEGG: stp:Strop_0904 hypothetical protein.
       0.878
ADL44470.1
PFAM: protein of unknown function DUF58; KEGG: saq:Sare_0846 hypothetical protein.
       0.873
ADL44465.1
KEGG: saq:Sare_0841 dienelactone hydrolase.
       0.806
ADL44468.1
KEGG: stp:Strop_0901 hypothetical protein.
       0.755
ADL44472.1
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: saq:Sare_0848 FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
       0.543
ADL48949.1
PFAM: peptidase M22 glycoprotease; KEGG: stp:Strop_3853 peptidase M22, glycoprotease.
  
    0.495
mutM
formamidopyrimidine-DNA glycosylase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates.
     
 0.494
Your Current Organism:
Micromonospora aurantiaca
NCBI taxonomy Id: 644283
Other names: M. aurantiaca ATCC 27029, Micromonospora aurantiaca ATCC 27029, Micromonospora aurantiaca str. ATCC 27029, Micromonospora aurantiaca strain ATCC 27029
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