STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL44467.1KEGG: stp:Strop_0900 hypothetical protein. (243 aa)    
Predicted Functional Partners:
ADL44470.1
PFAM: protein of unknown function DUF58; KEGG: saq:Sare_0846 hypothetical protein.
 
     0.978
ADL44469.1
PFAM: ATPase associated with various cellular activities AAA_3; KEGG: saq:Sare_0845 ATPase.
       0.914
ADL44471.1
KEGG: stp:Strop_0904 hypothetical protein.
       0.905
ADL44466.1
PFAM: Uracil-DNA glycosylase superfamily; KEGG: stp:Strop_0899 uracil-DNA glycosylase superfamily protein.
       0.888
ADL44468.1
KEGG: stp:Strop_0901 hypothetical protein.
       0.874
ADL44465.1
KEGG: saq:Sare_0841 dienelactone hydrolase.
       0.685
ADL48102.1
KEGG: saq:Sare_3541 TPR repeat-containing protein.
  
     0.638
ADL45542.1
PFAM: sulfotransferase; KEGG: stp:Strop_1735 sulfotransferase.
  
     0.631
ADL44472.1
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: saq:Sare_0848 FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
       0.628
ADL47871.1
PFAM: Lytic transglycosylase catalytic; KEGG: stp:Strop_3130 lytic transglycosylase, catalytic.
  
     0.586
Your Current Organism:
Micromonospora aurantiaca
NCBI taxonomy Id: 644283
Other names: M. aurantiaca ATCC 27029, Micromonospora aurantiaca ATCC 27029, Micromonospora aurantiaca str. ATCC 27029, Micromonospora aurantiaca strain ATCC 27029
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.