STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL44470.1PFAM: protein of unknown function DUF58; KEGG: saq:Sare_0846 hypothetical protein. (453 aa)    
Predicted Functional Partners:
ADL44467.1
KEGG: stp:Strop_0900 hypothetical protein.
 
     0.978
ADL44469.1
PFAM: ATPase associated with various cellular activities AAA_3; KEGG: saq:Sare_0845 ATPase.
 
  
 0.950
ADL44471.1
KEGG: stp:Strop_0904 hypothetical protein.
       0.914
ADL44466.1
PFAM: Uracil-DNA glycosylase superfamily; KEGG: stp:Strop_0899 uracil-DNA glycosylase superfamily protein.
       0.873
ADL44468.1
KEGG: stp:Strop_0901 hypothetical protein.
       0.829
ADL44465.1
KEGG: saq:Sare_0841 dienelactone hydrolase.
       0.700
ADL44472.1
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: saq:Sare_0848 FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
       0.602
ADL49279.1
KEGG: stp:Strop_0250 hypothetical protein.
 
     0.538
purD
Phosphoribosylamine/glycine ligase; PFAM: Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; Phosphoribosylglycinamide synthetase, N-domain; Phosphoribosylglycinamide synthetase, C-domain; manually curated; KEGG: saq:Sare_0140 phosphoribosylamine--glycine ligase; TIGRFAM: phosphoribosylamine/glycine ligase; Belongs to the GARS family.
      
 0.487
ADL44799.1
KEGG: stp:Strop_0250 hypothetical protein.
 
     0.470
Your Current Organism:
Micromonospora aurantiaca
NCBI taxonomy Id: 644283
Other names: M. aurantiaca ATCC 27029, Micromonospora aurantiaca ATCC 27029, Micromonospora aurantiaca str. ATCC 27029, Micromonospora aurantiaca strain ATCC 27029
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