STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL44517.1KEGG: stp:Strop_0945 hypothetical protein. (311 aa)    
Predicted Functional Partners:
ADL49288.1
Chitinase; PFAM: glycoside hydrolase family 18; chitinase domain protein; Carbohydrate-binding family V/XII; KEGG: sco:SCO1444 chitinase precursor; SMART: chitinase II; Carbohydrate-binding family V/XII.
    
 
 0.896
ADL44888.1
KEGG: stp:Strop_1255 hypothetical protein.
 
 
 0.756
ADL45966.1
Chromosome segregation and condensation protein ScpA; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.
  
 
 0.730
ADL45180.1
KEGG: saq:Sare_1472 hypothetical protein.
 
   
 0.713
ADL48611.1
KEGG: saq:Sare_3996 hypothetical protein.
  
     0.707
ADL44503.1
KEGG: saq:Sare_0874 hypothetical protein.
 
   
 0.694
ADL43989.1
KEGG: saq:Sare_4439 hypothetical protein.
 
 
 0.663
ADL43784.1
KEGG: stp:Strop_0153 hypothetical protein.
 
   
 0.653
ADL45649.1
KEGG: saq:Sare_1697 hypothetical protein.
  
     0.650
ADL46544.1
KEGG: saq:Sare_0972 hypothetical protein.
  
   
 0.650
Your Current Organism:
Micromonospora aurantiaca
NCBI taxonomy Id: 644283
Other names: M. aurantiaca ATCC 27029, Micromonospora aurantiaca ATCC 27029, Micromonospora aurantiaca str. ATCC 27029, Micromonospora aurantiaca strain ATCC 27029
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.