STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL44524.1KEGG: saq:Sare_0891 hypothetical protein. (122 aa)    
Predicted Functional Partners:
ADL44523.1
PFAM: protein of unknown function DUF1025; KEGG: saq:Sare_0890 hypothetical protein.
 
     0.790
ADL48227.1
KEGG: stp:Strop_3385 hypothetical protein.
  
   
 0.764
ADL49349.1
KEGG: saq:Sare_4701 hypothetical protein.
   
    0.762
ADL45181.1
PFAM: Protein of unknown function DUF3000; KEGG: saq:Sare_1473 hypothetical protein.
  
   
 0.667
ADL49354.1
KEGG: stp:Strop_4276 hypothetical protein.
  
     0.617
ADL47980.1
PFAM: protein of unknown function YGGT; KEGG: saq:Sare_3433 hypothetical protein.
  
     0.600
ADL46961.1
KEGG: saq:Sare_2248 hypothetical protein.
  
     0.596
ADL43961.1
KEGG: saq:Sare_4464 geranylgeranyl reductase; TIGRFAM: geranylgeranyl reductase; PFAM: monooxygenase FAD-binding.
  
     0.554
ADL45152.1
KEGG: saq:Sare_1443 hypothetical protein.
  
     0.545
whiB
Transcription factor WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA.
 
    0.542
Your Current Organism:
Micromonospora aurantiaca
NCBI taxonomy Id: 644283
Other names: M. aurantiaca ATCC 27029, Micromonospora aurantiaca ATCC 27029, Micromonospora aurantiaca str. ATCC 27029, Micromonospora aurantiaca strain ATCC 27029
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.