STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL44533.1PFAM: Saccharopine dehydrogenase; KEGG: mjl:Mjls_5327 saccharopine dehydrogenase. (400 aa)    
Predicted Functional Partners:
ADL44534.1
TIGRFAM: agmatinase; KEGG: gob:Gobs_1743 agmatinase; PFAM: Arginase/agmatinase/formiminoglutamase; Belongs to the arginase family.
    
 0.937
ADL46153.1
PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: stp:Strop_0681 Orn/DAP/Arg decarboxylase 2; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
  
 
 0.919
ADL47387.1
KEGG: app:CAP2UW1_1625 pyridoxal-dependent decarboxylase, exosortase system type 1 associated; TIGRFAM: pyridoxal-dependent decarboxylase, exosortase system type 1 associated; PFAM: Orn/DAP/Arg decarboxylase 2.
  
 
 0.919
lysA
Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.
  
 
 0.919
ADL46648.1
KEGG: saq:Sare_2381 lysine 2,3-aminomutase; PFAM: Radical SAM domain protein.
     
  0.900
ADL44532.1
PFAM: FAD dependent oxidoreductase; KEGG: tcu:Tcur_3392 FAD dependent oxidoreductase.
  
  
 0.875
ADL44531.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sma:SAV_2588 polyamine ABC transporter integral membrane protein.
       0.873
ADL47419.1
Beta-ketoacyl synthase; KEGG: cai:Caci_2598 KR domain protein; PFAM: Beta-ketoacyl synthase; KR domain protein; Enoyl-CoA hydratase/isomerase; phosphopantetheine-binding; Methyltransferase type 12; aromatic amino acid beta-eliminating lyase/threonine aldolase; alpha/beta hydrolase fold; SMART: Polyketide synthase, beta-ketoacyl synthase region; Polyketide synthase, phosphopantetheine-binding; Polyketide synthase/Fatty acid synthase, KR.
   
 
 0.798
ADL44530.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sco:SCO5669 polyamine ABC-transporter integral memb rane protein.
       0.776
ADL44528.1
PFAM: extracellular solute-binding protein family 1; KEGG: sco:SCO5667 ABC-transporter polyamine-binding lipoprotein.
       0.772
Your Current Organism:
Micromonospora aurantiaca
NCBI taxonomy Id: 644283
Other names: M. aurantiaca ATCC 27029, Micromonospora aurantiaca ATCC 27029, Micromonospora aurantiaca str. ATCC 27029, Micromonospora aurantiaca strain ATCC 27029
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