STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL44536.1Helix-turn-helix domain protein; KEGG: fre:Franean1_5820 XRE family transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein. (103 aa)    
Predicted Functional Partners:
ADL44535.1
PFAM: protein of unknown function DUF891; KEGG: fra:Francci3_0389 hypothetical protein.
 
   
 0.955
ADL44464.1
Hypothetical protein; KEGG: stp:Strop_1661 helix-turn-helix domain-containing protein.
 
   
 0.809
ADL44531.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sma:SAV_2588 polyamine ABC transporter integral membrane protein.
       0.747
ADL44532.1
PFAM: FAD dependent oxidoreductase; KEGG: tcu:Tcur_3392 FAD dependent oxidoreductase.
  
    0.746
ADL44533.1
PFAM: Saccharopine dehydrogenase; KEGG: mjl:Mjls_5327 saccharopine dehydrogenase.
       0.746
ADL44534.1
TIGRFAM: agmatinase; KEGG: gob:Gobs_1743 agmatinase; PFAM: Arginase/agmatinase/formiminoglutamase; Belongs to the arginase family.
       0.741
ADL44528.1
PFAM: extracellular solute-binding protein family 1; KEGG: sco:SCO5667 ABC-transporter polyamine-binding lipoprotein.
     
 0.590
ADL44530.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sco:SCO5669 polyamine ABC-transporter integral memb rane protein.
       0.586
ADL44529.1
KEGG: sma:SAV_2590 polyamine ABC transporter ATP-binding protein; PFAM: ABC transporter related; Transport-associated OB domain-containing protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
       0.585
ADL46319.1
PFAM: Lantibiotic dehydratase domain protein; KEGG: sro:Sros_2426 hypothetical protein.
  
     0.547
Your Current Organism:
Micromonospora aurantiaca
NCBI taxonomy Id: 644283
Other names: M. aurantiaca ATCC 27029, Micromonospora aurantiaca ATCC 27029, Micromonospora aurantiaca str. ATCC 27029, Micromonospora aurantiaca strain ATCC 27029
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.