STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL44556.1PFAM: protein of unknown function DUF343; KEGG: saq:Sare_0899 hypothetical protein; Belongs to the UPF0434 family. (68 aa)    
Predicted Functional Partners:
ADL44558.1
KEGG: stp:Strop_0964 cation diffusion facilitator family transporter; TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein.
       0.878
ADL44559.1
TIGRFAM: mannose-6-phosphate isomerase, class I; KEGG: saq:Sare_0902 mannose-6-phosphate isomerase, class I; PFAM: mannose-6-phosphate isomerase type I.
       0.878
ADL44557.1
PFAM: Bifunctional glucose-6-phosphate/mannose-6-phosphate isomerase-like; KEGG: saq:Sare_0900 hypothetical protein.
       0.827
pheT
TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit; KEGG: saq:Sare_1880 phenylalanyl-tRNA synthetase, beta subunit.
       0.666
ADL48377.1
KEGG: stp:Strop_3468 ComEC/Rec2-related protein; TIGRFAM: DNA internalization-related competence protein ComEC/Rec2; ComEC/Rec2-related protein; PFAM: ComEC/Rec2-related protein.
       0.584
ahcY
Adenosylhomocysteinase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine.
       0.519
ADL44555.1
KEGG: stp:Strop_0960 hypothetical protein.
       0.484
ADL48328.1
PFAM: Antibiotic biosynthesis monooxygenase; KEGG: stp:Strop_3435 antibiotic biosynthesis monooxygenase.
  
     0.432
ADL47978.1
KEGG: gob:Gobs_3253 hypothetical protein.
  
     0.430
nnrD-2
Carbohydrate kinase, YjeF related protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. In the C-terminal section; belongs to the NnrD/CARKD family.
       0.426
Your Current Organism:
Micromonospora aurantiaca
NCBI taxonomy Id: 644283
Other names: M. aurantiaca ATCC 27029, Micromonospora aurantiaca ATCC 27029, Micromonospora aurantiaca str. ATCC 27029, Micromonospora aurantiaca strain ATCC 27029
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