STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL44565.1PFAM: protein of unknown function DUF95 transmembrane; KEGG: mjl:Mjls_5230 hypothetical protein. (317 aa)    
Predicted Functional Partners:
ADL44564.1
PFAM: RDD domain containing protein; KEGG: sna:Snas_1614 RDD domain-containing protein.
 
    0.957
ADL44566.1
PFAM: protein of unknown function DUF58; KEGG: sna:Snas_1844 hypothetical protein.
 
  
 0.829
ADL44568.1
KEGG: sna:Snas_1846 hypothetical protein.
 
    0.783
ADL44569.1
KEGG: sna:Snas_1847 hypothetical protein.
 
    0.547
ADL44567.1
KEGG: kra:Krad_3819 ATPase associated with various cellular activities AAA_3; PFAM: ATPase associated with various cellular activities AAA_3; SMART: AAA ATPase.
 
    0.475
Your Current Organism:
Micromonospora aurantiaca
NCBI taxonomy Id: 644283
Other names: M. aurantiaca ATCC 27029, Micromonospora aurantiaca ATCC 27029, Micromonospora aurantiaca str. ATCC 27029, Micromonospora aurantiaca strain ATCC 27029
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.