STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL44661.1KEGG: ami:Amir_1964 hypothetical protein. (449 aa)    
Predicted Functional Partners:
ADL44660.1
KEGG: ami:Amir_1963 hypothetical protein.
       0.804
ADL44662.1
KEGG: ami:Amir_1965 hypothetical protein.
       0.793
ADL44658.1
PFAM: NERD domain protein; KEGG: oca:OCAR_4148 nuclease-related domain family.
       0.613
ADL44659.1
PFAM: pentapeptide repeat protein; KEGG: ami:Amir_6431 WD-40 repeat protein.
       0.613
Your Current Organism:
Micromonospora aurantiaca
NCBI taxonomy Id: 644283
Other names: M. aurantiaca ATCC 27029, Micromonospora aurantiaca ATCC 27029, Micromonospora aurantiaca str. ATCC 27029, Micromonospora aurantiaca strain ATCC 27029
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.