STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL44676.1PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: sco:SCO0089 transcriptional regulator. (325 aa)    
Predicted Functional Partners:
ADL44677.1
PFAM: beta-lactamase; KEGG: sco:SCO0088 secreted beta-lactamase.
 
   
 0.787
ADL44675.1
PFAM: Endonuclease I; KEGG: kfl:Kfla_0079 endonuclease I.
       0.645
ADL47930.1
KEGG: saq:Sare_3392 glutamate synthase (ferredoxin); PFAM: ferredoxin-dependent glutamate synthase; glutamine amidotransferase class-II; glutamate synthase; glutamate synthase alpha subunit domain protein.
     
 0.563
ADL44678.1
SMART: beta-lactamase domain protein; KEGG: sco:SCO0087 secreted protein.
       0.470
ADL47419.1
Beta-ketoacyl synthase; KEGG: cai:Caci_2598 KR domain protein; PFAM: Beta-ketoacyl synthase; KR domain protein; Enoyl-CoA hydratase/isomerase; phosphopantetheine-binding; Methyltransferase type 12; aromatic amino acid beta-eliminating lyase/threonine aldolase; alpha/beta hydrolase fold; SMART: Polyketide synthase, beta-ketoacyl synthase region; Polyketide synthase, phosphopantetheine-binding; Polyketide synthase/Fatty acid synthase, KR.
  
  
 0.457
ADL43896.1
ATP-binding region ATPase domain protein; KEGG: sna:Snas_1053 GAF sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase HAMP region domain protein; histidine kinase A domain protein; GAF domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; histidine kinase HAMP region domain protein; GAF domain protein.
   
  
 0.453
ADL44674.1
KEGG: mgi:Mflv_4697 2,5-didehydrogluconate reductase; PFAM: aldo/keto reductase.
       0.442
ADL45457.1
PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: nca:Noca_0226 LysR, substrate-binding; Belongs to the LysR transcriptional regulatory family.
  
     0.421
ADL46419.1
KEGG: saq:Sare_2299 winged helix family two component response transcriptional regulator; PFAM: transcriptional regulator domain-containing protein; SMART: transcriptional regulator domain-containing protein.
  
  
 0.400
Your Current Organism:
Micromonospora aurantiaca
NCBI taxonomy Id: 644283
Other names: M. aurantiaca ATCC 27029, Micromonospora aurantiaca ATCC 27029, Micromonospora aurantiaca str. ATCC 27029, Micromonospora aurantiaca strain ATCC 27029
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