STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL44751.1KEGG: saq:Sare_1008 cobalt ABC transporter, inner membrane subunit CbiQ; TIGRFAM: cobalt ABC transporter, inner membrane subunit CbiQ; PFAM: cobalt transport protein. (256 aa)    
Predicted Functional Partners:
ADL44749.1
PFAM: cobalamin (vitamin B12) biosynthesis CbiM protein; KEGG: stp:Strop_1116 cobalamin (vitamin B12) biosynthesis CbiM protein.
 
 0.999
ADL44752.1
Cobalt ABC transporter, ATPase subunit; Part of an ABC transporter complex. Responsible for energy coupling to the transport system.
 0.999
ADL44750.1
KEGG: saq:Sare_1007 hypothetical protein.
 
 0.997
ADL47453.1
KEGG: stp:Strop_4401 hypothetical protein.
  
 
 0.871
ADL44748.1
PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: stp:Strop_1115 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen.
       0.632
ADL47454.1
KEGG: stp:Strop_4400 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
 
 
 0.609
ADL48341.1
KEGG: stp:Strop_3443 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
 
 0.605
truA
tRNA-pseudouridine synthase I; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.
 
  
 0.592
ADL48108.1
PFAM: Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase; cobalbumin biosynthesis protein; KEGG: saq:Sare_3545 cobalbumin biosynthesis protein.
  
  
 0.556
ADL45519.1
TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: Oligopeptide/dipeptide ABC transporter domain protein; ABC transporter related; KEGG: afo:Afer_0890 oligopeptide/dipeptide ABC transporter, ATPase subunit; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
  
 
 0.550
Your Current Organism:
Micromonospora aurantiaca
NCBI taxonomy Id: 644283
Other names: M. aurantiaca ATCC 27029, Micromonospora aurantiaca ATCC 27029, Micromonospora aurantiaca str. ATCC 27029, Micromonospora aurantiaca strain ATCC 27029
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