STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL44753.1KEGG: sna:Snas_5779 hypothetical protein. (362 aa)    
Predicted Functional Partners:
ADL44754.1
PFAM: DSBA oxidoreductase; KEGG: saq:Sare_1010 DsbA oxidoreductase.
  
    0.908
ADL44756.1
KEGG: gob:Gobs_1273 RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2.
 
     0.892
ADL44755.1
PFAM: methylamine utilisation MauE; KEGG: stp:Strop_1121 DoxX family protein.
       0.838
ADL49728.1
KEGG: sna:Snas_5909 hypothetical protein.
  
     0.753
ADL43758.1
KEGG: saq:Sare_0138 hypothetical protein.
  
 
   0.719
ADL49062.1
PFAM: major facilitator superfamily MFS_1; KEGG: ami:Amir_3935 major facilitator superfamily MFS_1.
  
     0.719
ADL44757.1
PFAM: copper resistance protein CopC; KEGG: stp:Strop_1122 copper resistance protein CopC.
 
     0.713
ADL44715.1
KEGG: sna:Snas_3729 hypothetical protein.
  
     0.644
ADL44126.1
PFAM: Protein of unknown function DUF2984; KEGG: sna:Snas_5490 hypothetical protein.
  
     0.623
ADL47946.1
KEGG: saq:Sare_3405 hypothetical protein.
  
     0.615
Your Current Organism:
Micromonospora aurantiaca
NCBI taxonomy Id: 644283
Other names: M. aurantiaca ATCC 27029, Micromonospora aurantiaca ATCC 27029, Micromonospora aurantiaca str. ATCC 27029, Micromonospora aurantiaca strain ATCC 27029
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.