STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL44754.1PFAM: DSBA oxidoreductase; KEGG: saq:Sare_1010 DsbA oxidoreductase. (238 aa)    
Predicted Functional Partners:
ADL44755.1
PFAM: methylamine utilisation MauE; KEGG: stp:Strop_1121 DoxX family protein.
     0.935
ADL44753.1
KEGG: sna:Snas_5779 hypothetical protein.
  
    0.908
ADL44756.1
KEGG: gob:Gobs_1273 RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2.
  
    0.880
ADL48239.1
PFAM: DSBA oxidoreductase; KEGG: saq:Sare_3635 DsbA oxidoreductase.
  
     0.557
ADL43904.1
PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: saq:Sare_4518 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen.
 
 
 0.548
ADL44757.1
PFAM: copper resistance protein CopC; KEGG: stp:Strop_1122 copper resistance protein CopC.
 
     0.530
ADL44758.1
PFAM: nuclear export factor GLE1; KEGG: stp:Strop_1123 nuclear export factor GLE1.
       0.418
ADL49404.1
PFAM: Redoxin domain protein; KEGG: saq:Sare_4758 redoxin domain-containing protein.
 
 
 0.416
Your Current Organism:
Micromonospora aurantiaca
NCBI taxonomy Id: 644283
Other names: M. aurantiaca ATCC 27029, Micromonospora aurantiaca ATCC 27029, Micromonospora aurantiaca str. ATCC 27029, Micromonospora aurantiaca strain ATCC 27029
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.