STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL45263.1KEGG: cellulose-binding family II; PFAM: glycoside hydrolase family 5; cellulose-binding family II; SMART: cellulose-binding family II. (462 aa)    
Predicted Functional Partners:
ADL47163.1
KEGG: art:Arth_0871 beta-mannanase-like protein; Belongs to the glycosyl hydrolase 26 family.
 
   
  0.900
ADL46063.1
Ricin B lectin; KEGG: tfu:Tfu_1643 parallel beta-helix repeat-containing ricin B lectin; PFAM: Ricin B lectin; SMART: Ricin B lectin; Parallel beta-helix repeat.
 
     0.702
ADL47079.1
PFAM: Pectate lyase/Amb allergen; KEGG: sro:Sros_1493 pectate lyase; SMART: Pectate lyase/Amb allergen.
 
   
 0.675
ADL45505.1
PFAM: lipolytic protein G-D-S-L family; Ricin B lectin; KEGG: ami:Amir_3108 ricin B lectin.
 
 
   0.618
ADL46530.1
Pectate lyase/Amb allergen; KEGG: sco:SCO2821 secreted pectate lyase; PFAM: Pectate lyase/Amb allergen; SMART: Pectate lyase/Amb allergen; Parallel beta-helix repeat.
  
   
 0.596
ADL44601.1
PFAM: chitin-binding domain 3 protein; KEGG: sma:SAV_2168 secreted cellulose-binding protein.
 
     0.575
ADL44613.1
KEGG: saq:Sare_0964 ricin B lectin; PFAM: Ricin B lectin; SMART: Ricin B lectin.
  
   
 0.540
ADL47198.1
Ricin B lectin; KEGG: glycoside hydrolase family 43; PFAM: Ricin B lectin; glycoside hydrolase family 43; SMART: Ricin B lectin.
 
  
 0.539
ADL49492.1
Alpha-N-arabinofuranosidase; PFAM: Ricin B lectin; KEGG: ami:Amir_4966 alpha-N-arabinofuranosidase; SMART: Ricin B lectin.
 
     0.527
ADL43850.1
KEGG: sco:SCO5931 xylanase A; PFAM: glycoside hydrolase family 10; SMART: glycoside hydrolase family 10.
   
 0.506
Your Current Organism:
Micromonospora aurantiaca
NCBI taxonomy Id: 644283
Other names: M. aurantiaca ATCC 27029, Micromonospora aurantiaca ATCC 27029, Micromonospora aurantiaca str. ATCC 27029, Micromonospora aurantiaca strain ATCC 27029
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