STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL45489.1PFAM: transcriptional activator domain; transcriptional regulator domain-containing protein; NB-ARC domain protein; KEGG: sro:Sros_1461 transcriptional regulator, SARP family. (619 aa)    
Predicted Functional Partners:
ADL49152.1
PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: saq:Sare_0422 hydrolase.
  
    0.799
ADL49703.1
KEGG: stp:Strop_4510 transcription attenuator LytR; TIGRFAM: cell envelope-related function transcriptional attenuator, LytR/CpsA family; PFAM: cell envelope-related transcriptional attenuator.
   
    0.771
ADL48424.1
PFAM: CMP/dCMP deaminase zinc-binding; KEGG: sro:Sros_4568 cytosine/adenosine deaminase.
   
  
 0.770
ADL44986.1
PFAM: helix-turn-helix HxlR type; Sterol-binding domain protein; KEGG: rer:RER_19490 HxlR family transcriptional regulator.
   
    0.761
moaA
Molybdenum cofactor biosynthesis protein A; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate.
   
  
 0.668
ADL43648.1
Helix-turn-helix domain protein; KEGG: saq:Sare_0035 XRE family transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein.
  
    0.638
ADL46643.1
KEGG: saq:Sare_2378 AsnC family transcriptional regulator; PFAM: Transcription regulator AsnC-type-like; SMART: Transcription regulator AsnC-type.
   
    0.602
ADL47832.1
PFAM: regulatory protein ArsR; KEGG: stp:Strop_3084 regulatory protein, ArsR.
   
    0.598
cobB
Silent information regulator protein Sir2; NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form; Belongs to the sirtuin family. Class II subfamily.
   
    0.593
cobB-2
PFAM: Silent information regulator protein Sir2; KEGG: stp:Strop_2870 silent information regulator protein Sir2; Belongs to the sirtuin family. Class III subfamily.
   
    0.593
Your Current Organism:
Micromonospora aurantiaca
NCBI taxonomy Id: 644283
Other names: M. aurantiaca ATCC 27029, Micromonospora aurantiaca ATCC 27029, Micromonospora aurantiaca str. ATCC 27029, Micromonospora aurantiaca strain ATCC 27029
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