STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL45544.1SMART: Helix-turn-helix, AraC domain; KEGG: sna:Snas_2706 transcriptional regulator, AraC family. (236 aa)    
Predicted Functional Partners:
ADL45543.1
KEGG: pgu:PGUG_05063 hypothetical protein.
       0.565
ADL44247.1
KEGG: cwo:Cwoe_5146 hypothetical protein.
  
     0.511
ADL45542.1
PFAM: sulfotransferase; KEGG: stp:Strop_1735 sulfotransferase.
       0.471
ADL48377.1
KEGG: stp:Strop_3468 ComEC/Rec2-related protein; TIGRFAM: DNA internalization-related competence protein ComEC/Rec2; ComEC/Rec2-related protein; PFAM: ComEC/Rec2-related protein.
     
 0.467
ADL45486.1
PFAM: DoxX family protein; KEGG: sna:Snas_4770 DoxX family protein.
 
     0.447
ADL48267.1
PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: sen:SACE_3780 activator of HSP90 ATPase 1 family protein.
  
     0.439
ADL45538.1
KEGG: kfl:Kfla_4936 hypothetical protein.
  
     0.410
ADL46679.1
PFAM: protein of unknown function DUF1232; KEGG: fre:Franean1_0490 hypothetical protein.
  
     0.403
ADL46689.1
PFAM: protein of unknown function DUF1062; KEGG: sro:Sros_1342 hypothetical protein.
  
     0.403
ADL46042.1
PFAM: Methyltransferase type 11; KEGG: stp:Strop_0591 methyltransferase type 11.
  
     0.400
Your Current Organism:
Micromonospora aurantiaca
NCBI taxonomy Id: 644283
Other names: M. aurantiaca ATCC 27029, Micromonospora aurantiaca ATCC 27029, Micromonospora aurantiaca str. ATCC 27029, Micromonospora aurantiaca strain ATCC 27029
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.