STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL45564.1KEGG: sro:Sros_2246 hypothetical protein. (304 aa)    
Predicted Functional Partners:
ADL45563.1
KEGG: sgr:SGR_2795 RNA polymerase ECF-subfamily sigma factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein.
 
     0.884
ADL46273.1
KEGG: fra:Francci3_1530 hypothetical protein.
  
     0.665
ADL46565.1
KEGG: sma:SAV_528 integral membrane protein.
 
 
 
 0.624
ADL44618.1
PFAM: regulatory protein ArsR; KEGG: sro:Sros_7611 ArsR family transcriptional regulator.
  
     0.593
ADL45561.1
KEGG: tcu:Tcur_0482 hypothetical protein.
  
    0.573
ADL45565.1
KEGG: kfl:Kfla_2239 D-aspartate oxidase; PFAM: FAD dependent oxidoreductase.
       0.570
ADL45037.1
KEGG: ami:Amir_1164 hypothetical protein.
  
     0.549
ADL49501.1
SMART: AAA ATPase; KEGG: ami:Amir_4347 putative signal transduction protein with NACHT domain.
  
     0.531
ADL45560.1
KEGG: tcu:Tcur_0738 hypothetical protein.
  
    0.510
ADL45557.1
KEGG: tcu:Tcur_0478 hypothetical protein.
       0.508
Your Current Organism:
Micromonospora aurantiaca
NCBI taxonomy Id: 644283
Other names: M. aurantiaca ATCC 27029, Micromonospora aurantiaca ATCC 27029, Micromonospora aurantiaca str. ATCC 27029, Micromonospora aurantiaca strain ATCC 27029
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.