STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glgB1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily. (700 aa)    
Predicted Functional Partners:
glgE
Alpha amylase catalytic sub domain; Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1->4)-glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB.
 
 
 0.999
ADL46383.1
KEGG: mav:MAV_4100 glycogen debranching enzyme GlgX; TIGRFAM: glycogen debranching enzyme GlgX; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; Belongs to the glycosyl hydrolase 13 family.
 
 
0.990
glgC
Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.
 
  
 0.988
ADL48689.1
KEGG: met:M446_2621 alpha amylase catalytic region; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain.
 
 
 0.967
ADL46382.1
PFAM: glycosyl transferase group 1; Starch synthase catalytic domain-containing protein; KEGG: cai:Caci_3232 glycosyl transferase group 1.
  
 0.956
ADL47702.1
PFAM: glycosyl transferase group 1; Starch synthase catalytic domain-containing protein; KEGG: cai:Caci_3772 glycosyl transferase group 1.
  
 0.956
ADL45633.1
PFAM: glycosyl transferase group 1; KEGG: saq:Sare_1689 glycosyl transferase group 1.
   
 0.946
ADL47225.1
KEGG: saq:Sare_2896 alpha-amylase; PFAM: alpha amylase catalytic region; glycoside hydrolase starch-binding; alpha amylase all-beta; SMART: alpha amylase all-beta.
  
 
 0.926
ADL45656.1
KEGG: saq:Sare_1699 phosphoglucomutase; TIGRFAM: phosphoglucomutase, alpha-D-glucose phosphate-specific; PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase.
 
  
 0.907
ADL48250.1
KEGG: svi:Svir_05290 glycosidase; PFAM: alpha amylase catalytic region; alpha amylase all-beta; SMART: alpha amylase catalytic sub domain; alpha amylase all-beta.
     
  0.900
Your Current Organism:
Micromonospora aurantiaca
NCBI taxonomy Id: 644283
Other names: M. aurantiaca ATCC 27029, Micromonospora aurantiaca ATCC 27029, Micromonospora aurantiaca str. ATCC 27029, Micromonospora aurantiaca strain ATCC 27029
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