STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL45684.1PFAM: regulatory protein TetR; KEGG: sco:SCO6781 regulatory protein. (404 aa)    
Predicted Functional Partners:
ADL45683.1
PFAM: Protein of unknown function DUF2236; KEGG: sco:SCO6780 secreted protein.
  
     0.752
ADL45685.1
PFAM: regulatory protein TetR; KEGG: rop:ROP_61700 putative TetR family transcriptional regulator.
 
    
0.695
ADL45679.1
Hypothetical protein; PFAM: Twin-arginine translocation pathway, signal sequence, subgroup; KEGG: sro:Sros_5156 hypothetical protein.
  
     0.611
ADL45687.1
PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase domain-containing protein; Enoyl-CoA hydratase/isomerase; KEGG: sen:SACE_6362 putative 3-hydroxyacyl-CoA dehydrogenase.
 
   
 0.545
ADL46105.1
PFAM: alpha-L-arabinofuranosidase B; KEGG: ami:Amir_1971 alpha-L-arabinofuranosidase B.
  
     0.514
ADL46223.1
PFAM: alpha-L-arabinofuranosidase B; Glycosyl hydrolase family 32 domain protein; KEGG: ami:Amir_1971 alpha-L-arabinofuranosidase B.
  
     0.506
ADL47579.1
KEGG: saq:Sare_2623 hypothetical protein.
  
     0.495
ADL47095.1
KEGG: dol:Dole_2544 TetR family transcriptional regulator.
  
     0.481
ADL45696.1
PFAM: regulatory protein TetR; KEGG: sro:Sros_5157 putative transcriptional regulator, TetR family.
  
     0.476
ADL45686.1
TIGRFAM: acetyl-CoA acetyltransferase; KEGG: sen:SACE_6363 acetyl-CoA acetyltransferase; PFAM: Thiolase-like; Belongs to the thiolase-like superfamily. Thiolase family.
     
 0.438
Your Current Organism:
Micromonospora aurantiaca
NCBI taxonomy Id: 644283
Other names: M. aurantiaca ATCC 27029, Micromonospora aurantiaca ATCC 27029, Micromonospora aurantiaca str. ATCC 27029, Micromonospora aurantiaca strain ATCC 27029
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.