STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL45712.1Protein of unknown function DUF3516; KEGG: stp:Strop_1732 DEAD/DEAH box helicase domain-containing protein; PFAM: Protein of unknown function DUF3516; DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase; helicase domain protein. (834 aa)    
Predicted Functional Partners:
trmB
tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.
       0.767
ADL47847.1
Preprotein translocase, SecG subunit; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.
  
     0.576
ADL45701.1
TIGRFAM: ATP-dependent helicase HrpA; PFAM: helicase-associated domain protein; helicase domain protein; DEAD/DEAH box helicase domain protein; protein of unknown function DUF1605; KEGG: stp:Strop_1712 ATP-dependent helicase HrpA; SMART: helicase-associated domain protein; DEAD-like helicase; helicase domain protein; AAA ATPase.
 
     0.524
ADL45714.1
KEGG: saq:Sare_1718 hypothetical protein.
       0.467
ADL45178.1
KEGG: saq:Sare_1470 3'-5' exonuclease; PFAM: 3'-5' exonuclease; HRDC domain protein; SMART: 3'-5' exonuclease; HRDC domain protein.
  
     0.464
ADL45715.1
PFAM: peptidase C60 sortase A and B; KEGG: stp:Strop_1734 peptidase C60, sortase A and B.
       0.451
ADL46747.1
KEGG: saq:Sare_2520 FHA domain-containing protein; PFAM: Forkhead-associated protein; SMART: Forkhead-associated protein.
  
     0.428
ADL48472.1
KEGG: sgr:SGR_5641 cobyrinic acid a,c-diamide synthase; TIGRFAM: cobyrinic acid a,c-diamide synthase; PFAM: CobB/CobQ domain protein glutamine amidotransferase.
   
    0.414
Your Current Organism:
Micromonospora aurantiaca
NCBI taxonomy Id: 644283
Other names: M. aurantiaca ATCC 27029, Micromonospora aurantiaca ATCC 27029, Micromonospora aurantiaca str. ATCC 27029, Micromonospora aurantiaca strain ATCC 27029
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.