STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL45715.1PFAM: peptidase C60 sortase A and B; KEGG: stp:Strop_1734 peptidase C60, sortase A and B. (336 aa)    
Predicted Functional Partners:
ADL45714.1
KEGG: saq:Sare_1718 hypothetical protein.
       0.783
trmB
tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.
       0.547
ADL44817.1
PFAM: Anti-sigma K factor RskA; KEGG: stp:Strop_4203 hypothetical protein.
 
     0.502
ADL44819.1
KEGG: stp:Strop_4205 hypothetical protein.
 
     0.458
ADL45712.1
Protein of unknown function DUF3516; KEGG: stp:Strop_1732 DEAD/DEAH box helicase domain-containing protein; PFAM: Protein of unknown function DUF3516; DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase; helicase domain protein.
       0.451
Your Current Organism:
Micromonospora aurantiaca
NCBI taxonomy Id: 644283
Other names: M. aurantiaca ATCC 27029, Micromonospora aurantiaca ATCC 27029, Micromonospora aurantiaca str. ATCC 27029, Micromonospora aurantiaca strain ATCC 27029
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.