STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL45782.1KEGG: stp:Strop_1772 hypothetical protein. (144 aa)    
Predicted Functional Partners:
ADL45784.1
KEGG: saq:Sare_1761 hypothetical protein.
 
     0.928
ADL45783.1
PFAM: Protein of unknown function DUF3618; KEGG: saq:Sare_1760 hypothetical protein.
       0.827
ADL48300.1
Ribonuclease BN; KEGG: scb:SCAB_43371 putative ribonuclease; TIGRFAM: ribonuclease BN; PFAM: ribonuclease BN.
     0.500
ADL45781.1
PFAM: MscS Mechanosensitive ion channel; KEGG: saq:Sare_1758 MscS mechanosensitive ion channel.
  
    0.492
ADL45759.1
Ribonuclease BN; KEGG: nfa:nfa16420 putative ribonuclease; TIGRFAM: ribonuclease BN; PFAM: ribonuclease BN.
     0.439
ADL44701.1
PFAM: HesB/YadR/YfhF-family protein; KEGG: saq:Sare_0979 HesB/YadR/YfhF-family protein; Belongs to the HesB/IscA family.
  
     0.414
ADL45785.1
KEGG: saq:Sare_1762 cold-shock DNA-binding domain-containing protein; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein.
       0.409
Your Current Organism:
Micromonospora aurantiaca
NCBI taxonomy Id: 644283
Other names: M. aurantiaca ATCC 27029, Micromonospora aurantiaca ATCC 27029, Micromonospora aurantiaca str. ATCC 27029, Micromonospora aurantiaca strain ATCC 27029
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.