STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL45792.1PFAM: ADP-ribosylation/Crystallin J1; KEGG: saq:Sare_1769 ADP-ribosylation/crystallin J1. (309 aa)    
Predicted Functional Partners:
ADL45791.1
Response regulator receiver; KEGG: saq:Sare_1768 two component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver.
       0.562
ADL46059.1
PFAM: Protein of unknown function DUF2263; KEGG: sna:Snas_3552 hypothetical protein.
 
   
 0.535
ADL45790.1
KEGG: saq:Sare_1767 histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: histidine kinase HAMP region domain protein; ATP-binding region ATPase domain protein.
 
     0.473
ADL45554.1
KEGG: stp:Strop_2864 hypothetical protein.
  
     0.418
ADL48372.1
KEGG: saq:Sare_3842 hypothetical protein.
  
     0.417
ADL48165.1
KEGG: stp:Strop_2864 hypothetical protein.
  
     0.410
ADL44786.1
KEGG: cai:Caci_0862 RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein.
  
     0.405
Your Current Organism:
Micromonospora aurantiaca
NCBI taxonomy Id: 644283
Other names: M. aurantiaca ATCC 27029, Micromonospora aurantiaca ATCC 27029, Micromonospora aurantiaca str. ATCC 27029, Micromonospora aurantiaca strain ATCC 27029
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.