STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL45816.1PFAM: transcriptional regulator PadR family protein; KEGG: sro:Sros_4235 transcriptional regulator, PadR family. (113 aa)    
Predicted Functional Partners:
ADL45815.1
KEGG: bcv:Bcav_0495 hypothetical protein.
 
     0.978
ADL44359.1
PFAM: transcriptional regulator PadR family protein; KEGG: ami:Amir_0778 transcriptional regulator, PadR-like family.
  
     0.720
ADL44461.1
PFAM: transcriptional regulator PadR family protein; KEGG: stp:Strop_0895 transcriptional regulator PadR family protein.
  
     0.683
ADL43621.1
PFAM: transcriptional regulator PadR family protein; KEGG: bcv:Bcav_1031 transcriptional regulator, PadR-like family.
  
     0.597
ADL45817.1
DNA polymerase III, alpha subunit; SMART: phosphoesterase PHP domain protein; TIGRFAM: DNA polymerase III, alpha subunit; KEGG: stp:Strop_1798 DNA polymerase III subunit alpha; PFAM: DNA polymerase III alpha subunit; nucleic acid binding OB-fold tRNA/helicase-type; PHP domain protein.
       0.504
ADL45814.1
KEGG: tcu:Tcur_0798 RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein.
  
    0.491
ADL45813.1
Hypothetical protein; KEGG: ach:Achl_0696 peptidase M23.
       0.480
Your Current Organism:
Micromonospora aurantiaca
NCBI taxonomy Id: 644283
Other names: M. aurantiaca ATCC 27029, Micromonospora aurantiaca ATCC 27029, Micromonospora aurantiaca str. ATCC 27029, Micromonospora aurantiaca strain ATCC 27029
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.