STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL45820.1PFAM: aminotransferase class V; KEGG: saq:Sare_1785 aminotransferase class V. (355 aa)    
Predicted Functional Partners:
ADL47826.1
KEGG: stp:Strop_3078 NifU family SUF system FeS assembly protein; TIGRFAM: SUF system FeS assembly protein, NifU family; PFAM: nitrogen-fixing NifU domain protein.
 
 
 0.936
ADL47828.1
TIGRFAM: FeS assembly ATPase SufC; PFAM: ABC transporter related; KEGG: saq:Sare_3307 FeS assembly ATPase SufC; SMART: AAA ATPase.
 
  
 0.797
ADL47830.1
KEGG: saq:Sare_3309 FeS assembly protein SufD; TIGRFAM: FeS assembly protein SufD; PFAM: SufBD protein.
 
 
 0.730
ADL47831.1
KEGG: saq:Sare_3310 FeS assembly protein SufB; TIGRFAM: FeS assembly protein SufB; PFAM: SufBD protein.
 
 
 0.728
ADL43614.1
PFAM: Fe-S metabolism associated SufE; KEGG: saq:Sare_0025 Fe-S metabolism associated SufE.
  
 
 0.604
ADL47419.1
Beta-ketoacyl synthase; KEGG: cai:Caci_2598 KR domain protein; PFAM: Beta-ketoacyl synthase; KR domain protein; Enoyl-CoA hydratase/isomerase; phosphopantetheine-binding; Methyltransferase type 12; aromatic amino acid beta-eliminating lyase/threonine aldolase; alpha/beta hydrolase fold; SMART: Polyketide synthase, beta-ketoacyl synthase region; Polyketide synthase, phosphopantetheine-binding; Polyketide synthase/Fatty acid synthase, KR.
  
 
 0.469
egtD
Methyltransferase; Catalyzes the SAM-dependent triple methylation of the alpha- amino group of histidine to form hercynine, a step in the biosynthesis pathway of ergothioneine; Belongs to the methyltransferase superfamily. EgtD family.
  
  
 0.433
ADL43608.1
TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase; KEGG: saq:Sare_0021 ATPase, P-type (transporting), HAD superfamily, subfamily IC; SMART: cation transporting ATPase domain protein.
 
  
 0.405
Your Current Organism:
Micromonospora aurantiaca
NCBI taxonomy Id: 644283
Other names: M. aurantiaca ATCC 27029, Micromonospora aurantiaca ATCC 27029, Micromonospora aurantiaca str. ATCC 27029, Micromonospora aurantiaca strain ATCC 27029
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