STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL45952.1SMART: regulatory protein LuxR; KEGG: kfl:Kfla_0067 transcriptional regulator, TrmB. (324 aa)    
Predicted Functional Partners:
ADL49712.1
KEGG: stp:Strop_4518 hypothetical protein.
   
    0.805
ADL44855.1
KEGG: cai:Caci_8542 hypothetical protein.
   
    0.764
ADL45292.1
PFAM: restriction endonuclease; KEGG: mjl:Mjls_0822 restriction endonuclease.
   
    0.764
ADL45951.1
PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; protease-associated PA domain protein; KEGG: kfl:Kfla_0068 peptidase S8 and S53 subtilisin kexin sedolisin; Belongs to the peptidase S8 family.
 
     0.711
ADL45575.1
KEGG: kfl:Kfla_4943 peptidase S8 and S53 subtilisin kexin sedolisin; PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; Kelch repeat type 1-containing protein; SMART: Kelch repeat type 1-containing protein.
 
     0.704
ADL46767.1
KEGG: svi:Svir_19180 formate dehydrogenase beta subunit.
   
    0.610
ADL45953.1
DNA repair protein RecN; May be involved in recombinational repair of damaged DNA.
       0.552
ADL44769.1
PFAM: protein of unknown function DUF1557; YD repeat-containing protein; KEGG: sro:Sros_7436 rhs family protein-like protein.
  
     0.531
ADL46598.1
KEGG: kfl:Kfla_4491 hypothetical protein.
  
     0.527
ADL48428.1
KEGG: sro:Sros_8143 hypothetical protein; PFAM: peptidase M14 carboxypeptidase A; SMART: peptidase M14 carboxypeptidase A.
  
     0.524
Your Current Organism:
Micromonospora aurantiaca
NCBI taxonomy Id: 644283
Other names: M. aurantiaca ATCC 27029, Micromonospora aurantiaca ATCC 27029, Micromonospora aurantiaca str. ATCC 27029, Micromonospora aurantiaca strain ATCC 27029
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