STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL46022.1KEGG: bcv:Bcav_3544 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase. (313 aa)    
Predicted Functional Partners:
ADL46023.1
PFAM: ABC-2 type transporter; KEGG: cwo:Cwoe_0613 ABC-2 type transporter.
 
    0.959
ADL44397.1
PFAM: ABC-2 type transporter; KEGG: cai:Caci_3247 ABC-2 type transporter.
 
    0.520
ADL47232.1
PFAM: ABC-2 type transporter; KEGG: cai:Caci_3247 ABC-2 type transporter.
 
    0.491
ADL47451.1
ATP-binding region ATPase domain protein; KEGG: sco:SCO1369 two component system histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerization and phosphoacceptor region; SMART: ATP-binding region ATPase domain protein.
  
  
 0.476
ADL47452.1
Response regulator receiver; KEGG: sco:SCO1370 two component system DNA binding response regulator; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR.
       0.469
ADL44669.1
PFAM: ABC-2 type transporter; KEGG: scb:SCAB_45251 putative ABC transporter transmembrane subunit.
  
 0.455
ADL46024.1
KEGG: sgr:SGR_6080 hypothetical protein.
       0.443
ADL46025.1
KEGG: bcv:Bcav_0117 glyoxalase/bleomycin resistance protein/dioxygenase.
       0.416
ADL46021.1
AHBA synthesis associated protein; KEGG: fra:Francci3_0431 3-amino-5-hydroxybenoic acid synthesis related; TIGRFAM: AHBA synthesis associated protein; HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase.
       0.404
Your Current Organism:
Micromonospora aurantiaca
NCBI taxonomy Id: 644283
Other names: M. aurantiaca ATCC 27029, Micromonospora aurantiaca ATCC 27029, Micromonospora aurantiaca str. ATCC 27029, Micromonospora aurantiaca strain ATCC 27029
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