STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL46028.1KEGG: saq:Sare_2789 copper resistance protein CopC. (195 aa)    
Predicted Functional Partners:
ADL46027.1
KEGG: sro:Sros_9082 hypothetical protein.
       0.773
ADL44758.1
PFAM: nuclear export factor GLE1; KEGG: stp:Strop_1123 nuclear export factor GLE1.
  
  
 0.546
ADL45793.1
KEGG: stp:Strop_1123 nuclear export factor GLE1.
  
  
 0.546
ADL47194.1
PFAM: protein of unknown function DUF461; KEGG: saq:Sare_2787 hypothetical protein.
  
    0.485
ADL49346.1
KEGG: saq:Sare_4698 hypothetical protein.
  
    0.485
ADL46026.1
KEGG: stp:Strop_0153 hypothetical protein.
       0.462
ADL46029.1
PFAM: cytochrome P450; KEGG: mmi:MMAR_0283 cytochrome P450 274A1 Cyp274A1.
       0.454
ADL44563.1
Dyp-type peroxidase family; Involved in the recovery of exogenous heme iron. Extracts iron from heme while preserving the tetrapyrrol ring intact. Belongs to the DyP-type peroxidase family.
  
  
 0.446
ADL47195.1
KEGG: saq:Sare_2788 Dyp-type peroxidase family protein; TIGRFAM: Dyp-type peroxidase family; PFAM: Dyp-type peroxidase.
  
  
 0.446
ADL48697.1
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerization region; KEGG: saq:Sare_4051 pyridine nucleotide-disulphide oxidoreductase dimerization region.
    
   0.412
Your Current Organism:
Micromonospora aurantiaca
NCBI taxonomy Id: 644283
Other names: M. aurantiaca ATCC 27029, Micromonospora aurantiaca ATCC 27029, Micromonospora aurantiaca str. ATCC 27029, Micromonospora aurantiaca strain ATCC 27029
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