STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL46036.1PFAM: protein of unknown function DUF1486; KEGG: stp:Strop_0619 hypothetical protein. (206 aa)    
Predicted Functional Partners:
ADL44389.1
Regulatory protein MarR; KEGG: saq:Sare_0789 MarR family transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR.
  
     0.426
ADL47871.1
PFAM: Lytic transglycosylase catalytic; KEGG: stp:Strop_3130 lytic transglycosylase, catalytic.
  
     0.424
ADL49560.1
KEGG: mva:Mvan_1092 hypothetical protein.
  
     0.424
ADL46035.1
KEGG: sus:Acid_6106 hypothetical protein.
       0.410
ADL49485.1
PFAM: NADP oxidoreductase coenzyme F420-dependent; KEGG: kfl:Kfla_0085 NADP oxidoreductase coenzyme F420-dependent.
  
     0.402
Your Current Organism:
Micromonospora aurantiaca
NCBI taxonomy Id: 644283
Other names: M. aurantiaca ATCC 27029, Micromonospora aurantiaca ATCC 27029, Micromonospora aurantiaca str. ATCC 27029, Micromonospora aurantiaca strain ATCC 27029
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