STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL46044.1PFAM: protein of unknown function DUF1702; KEGG: stp:Strop_0592 hypothetical protein. (314 aa)    
Predicted Functional Partners:
ADL46045.1
PFAM: FG-GAP repeat protein; KEGG: stp:Strop_0593 FG-GAP repeat-containing protein.
 
  
  0.992
ADL46052.1
KEGG: stp:Strop_0597 hypothetical protein.
 
  
  0.984
ADL46054.1
KEGG: stp:Strop_0599 thioesterase-like protein.
 
     0.848
ADL46053.1
PFAM: Beta-ketoacyl synthase; Acyl transferase; short-chain dehydrogenase/reductase SDR; KEGG: stp:Strop_0598 beta-ketoacyl synthase.
 
     0.819
ADL46027.1
KEGG: sro:Sros_9082 hypothetical protein.
 
     0.782
ADL46042.1
PFAM: Methyltransferase type 11; KEGG: stp:Strop_0591 methyltransferase type 11.
 
     0.741
ADL46043.1
KEGG: stp:Strop_0611 hypothetical protein.
       0.675
ADL47457.1
KEGG: stp:Strop_4397 cell wall anchor domain-containing protein.
  
     0.626
ADL47456.1
KEGG: stp:Strop_4398 hypothetical protein.
  
     0.601
selA
L-seryl-tRNA(Sec) selenium transferase; Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis.
       0.572
Your Current Organism:
Micromonospora aurantiaca
NCBI taxonomy Id: 644283
Other names: M. aurantiaca ATCC 27029, Micromonospora aurantiaca ATCC 27029, Micromonospora aurantiaca str. ATCC 27029, Micromonospora aurantiaca strain ATCC 27029
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.