STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL46114.1PFAM: Carboxylyase-related protein; KEGG: cai:Caci_3679 carboxylyase-related protein; Belongs to the UbiD family. (487 aa)    
Predicted Functional Partners:
ADL43915.1
KEGG: saq:Sare_4512 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; TIGRFAM: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; PFAM: flavoprotein.
 
  
 0.932
ADL46116.1
PFAM: Cupin 2 conserved barrel domain protein; KEGG: cai:Caci_3677 cupin 2 conserved barrel domain protein.
 
     0.887
ADL46117.1
PFAM: NADPH-dependent FMN reductase; KEGG: cai:Caci_3676 NADPH-dependent FMN reductase.
 
     0.847
ADL46115.1
PFAM: Chorismate mutase, type II; KEGG: cai:Caci_3678 chorismate mutase.
 
     0.830
ADL46120.1
PFAM: ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; KEGG: cai:Caci_3673 ATP-dependent carboxylate-amine ligase domain protein ATP-grasp.
 
     0.741
ADL43913.1
KEGG: stp:Strop_4093 prenyltransferase; TIGRFAM: 4-hydroxybenzoate polyprenyltransferase; PFAM: UbiA prenyltransferase; Belongs to the UbiA prenyltransferase family.
 
   
 0.728
trpB
Pyridoxal-phosphate dependent TrpB-like enzyme; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.
       0.724
ADL46121.1
KEGG: cai:Caci_3672 B3/4 domain protein; PFAM: B3/4 domain protein; SMART: B3/4 domain protein.
 
     0.697
ADL46119.1
PFAM: major facilitator superfamily MFS_1; KEGG: cai:Caci_3674 major facilitator superfamily MFS_1.
 
     0.681
mqnE
Radical SAM domain protein; Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3-[(1-carboxyvinyl)oxy]benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate.
 
   
 0.569
Your Current Organism:
Micromonospora aurantiaca
NCBI taxonomy Id: 644283
Other names: M. aurantiaca ATCC 27029, Micromonospora aurantiaca ATCC 27029, Micromonospora aurantiaca str. ATCC 27029, Micromonospora aurantiaca strain ATCC 27029
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