STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL46414.1PFAM: Protein of unknown function DUF3500; KEGG: saq:Sare_2298 hypothetical protein. (335 aa)    
Predicted Functional Partners:
ADL46415.1
Ankyrin; KEGG: gob:Gobs_2134 ankyrin; PFAM: Ankyrin; SMART: Ankyrin.
     
 0.774
ADL46416.1
KEGG: sco:SCO4221 hypothetical protein.
       0.562
ADL43662.1
PFAM: NAD-dependent epimerase/dehydratase; KEGG: sna:Snas_0259 NAD-dependent epimerase/dehydratase.
  
    0.506
ADL44291.1
KEGG: ami:Amir_2781 glycoside hydrolase family 5; PFAM: glycoside hydrolase family 5; cellulose-binding family II; protein of unknown function DUF291; SMART: cellulose-binding family II.
  
 
   0.460
ADL43947.1
KEGG: stp:Strop_4074 hypothetical protein.
  
     0.415
ADL47331.1
KEGG: ami:Amir_2665 hypothetical protein.
  
     0.410
Your Current Organism:
Micromonospora aurantiaca
NCBI taxonomy Id: 644283
Other names: M. aurantiaca ATCC 27029, Micromonospora aurantiaca ATCC 27029, Micromonospora aurantiaca str. ATCC 27029, Micromonospora aurantiaca strain ATCC 27029
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.