STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL46441.1PFAM: peptidase M20; peptidase dimerization domain protein; KEGG: saq:Sare_2313 hypothetical protein. (442 aa)    
Predicted Functional Partners:
ADL46442.1
KEGG: saq:Sare_2314 hypothetical protein.
       0.682
ADL46440.1
KEGG: sen:SACE_4177 hypothetical protein.
       0.544
ADL48816.1
KEGG: saq:Sare_4134 succinyl-diaminopimelate desuccinylase; TIGRFAM: succinyl-diaminopimelate desuccinylase; PFAM: peptidase M20; peptidase dimerization domain protein.
  
   
 0.509
ADL46439.1
PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: saq:Sare_2312 LysR family transcriptional regulator.
   
 
 0.474
ADL46650.1
PFAM: Amidohydrolase 3; KEGG: saq:Sare_2383 amidohydrolase 3.
 
   
 0.456
ADL48083.1
Cytochrome-c oxidase; Part of cytochrome c oxidase, its function is unknown. Belongs to the cytochrome c oxidase bacterial subunit CtaF family.
 
     0.433
ADL46438.1
KEGG: saq:Sare_2311 hypothetical protein.
       0.425
ADL48093.1
KEGG: saq:Sare_3540 hypothetical protein.
 
     0.425
ADL49278.1
PFAM: Protein of unknown function DUF3263; KEGG: stp:Strop_0251 hypothetical protein.
  
     0.416
argC
N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily.
  
 
 0.408
Your Current Organism:
Micromonospora aurantiaca
NCBI taxonomy Id: 644283
Other names: M. aurantiaca ATCC 27029, Micromonospora aurantiaca ATCC 27029, Micromonospora aurantiaca str. ATCC 27029, Micromonospora aurantiaca strain ATCC 27029
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