STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL46517.1PFAM: Lipoprotein LpqB, GerMN domain; KEGG: stp:Strop_2568 hypothetical protein. (187 aa)    
Predicted Functional Partners:
ADL46515.1
KEGG: stp:Strop_2570 response regulator receiver; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver; transcriptional regulator domain-containing protein.
     
 0.874
ADL46516.1
KEGG: saq:Sare_2765 histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein.
       0.869
ADL46514.1
PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: saq:Sare_2767 anti-sigma-factor antagonist.
     
 0.590
ADL46512.1
PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: saq:Sare_2769 anti-sigma-factor antagonist.
     
 0.537
ADL46513.1
KEGG: saq:Sare_2768 hypothetical protein.
       0.532
ADL46511.1
PFAM: transport-associated; KEGG: saq:Sare_2770 transport-associated.
       0.523
ADL46518.1
KEGG: fre:Franean1_0974 FliA/WhiG family RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma-70 factor, sigma-B/F/G subfamily; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 4 domain protein; sigma-70 region 2 domain protein; sigma-70 region 3 domain protein.
       0.482
Your Current Organism:
Micromonospora aurantiaca
NCBI taxonomy Id: 644283
Other names: M. aurantiaca ATCC 27029, Micromonospora aurantiaca ATCC 27029, Micromonospora aurantiaca str. ATCC 27029, Micromonospora aurantiaca strain ATCC 27029
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.