STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL46534.1KEGG: saq:Sare_3409 low temperature requirement A. (443 aa)    
Predicted Functional Partners:
ADL46533.1
KEGG: esterase, PHB depolymerase family; PFAM: Activator of Hsp90 ATPase 1 family protein; cellulose-binding family II; SMART: cellulose-binding family II.
       0.714
ADL46535.1
PFAM: regulatory protein TetR; KEGG: ami:Amir_2525 transcriptional regulator, TetR family.
       0.556
ADL49751.1
KEGG: saq:Sare_5061 hypothetical protein.
  
     0.535
ADL45624.1
KEGG: saq:Sare_1677 hypothetical protein.
  
     0.449
ADL46078.1
KEGG: saq:Sare_2057 hypothetical protein.
  
     0.437
ADL47855.1
KEGG: stp:Strop_3431 hypothetical protein.
  
     0.410
ADL48323.1
KEGG: stp:Strop_3431 hypothetical protein.
  
     0.410
ADL46350.1
KEGG: stp:Strop_3431 hypothetical protein.
  
     0.409
ADL44170.1
KEGG: fre:Franean1_6526 hypothetical protein.
  
     0.407
ADL49346.1
KEGG: saq:Sare_4698 hypothetical protein.
  
     0.406
Your Current Organism:
Micromonospora aurantiaca
NCBI taxonomy Id: 644283
Other names: M. aurantiaca ATCC 27029, Micromonospora aurantiaca ATCC 27029, Micromonospora aurantiaca str. ATCC 27029, Micromonospora aurantiaca strain ATCC 27029
Server load: medium (52%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.