STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL46650.1PFAM: Amidohydrolase 3; KEGG: saq:Sare_2383 amidohydrolase 3. (523 aa)    
Predicted Functional Partners:
ADL46649.1
KEGG: stp:Strop_2263 hypothetical protein.
       0.802
ADL46652.1
PFAM: cobalamin B12-binding domain protein; KEGG: saq:Sare_2385 cobalamin B12-binding domain-containing protein.
       0.800
ADL46651.1
PFAM: D-Lysine 56-aminomutase alpha subunit; KEGG: saq:Sare_2384 D-lysine 56-aminomutase alpha subunit.
       0.796
ADL46653.1
PFAM: thioesterase superfamily protein; KEGG: saq:Sare_2386 hypothetical protein.
       0.794
ADL46661.1
PFAM: FxsA cytoplasmic membrane protein; KEGG: saq:Sare_2390 FxsA cytoplasmic membrane protein.
  
    0.770
ADL46654.1
KEGG: stp:Strop_2268 hypothetical protein.
       0.646
ADL46648.1
KEGG: saq:Sare_2381 lysine 2,3-aminomutase; PFAM: Radical SAM domain protein.
       0.570
ADL46441.1
PFAM: peptidase M20; peptidase dimerization domain protein; KEGG: saq:Sare_2313 hypothetical protein.
 
   
 0.456
ADL44943.1
PFAM: amidohydrolase; KEGG: stp:Strop_1302 amidohydrolase.
  
     0.440
ADL44509.1
KEGG: saq:Sare_0880 hypothetical protein.
  
     0.417
Your Current Organism:
Micromonospora aurantiaca
NCBI taxonomy Id: 644283
Other names: M. aurantiaca ATCC 27029, Micromonospora aurantiaca ATCC 27029, Micromonospora aurantiaca str. ATCC 27029, Micromonospora aurantiaca strain ATCC 27029
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.