STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL46704.1KEGG: saq:Sare_2485 hypothetical protein. (465 aa)    
Predicted Functional Partners:
ADL46705.1
PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: saq:Sare_2484 glycerophosphoryl diester phosphodiesterase.
 
     0.881
ADL46703.1
KEGG: stp:Strop_2343 thymidine kinase; PFAM: thymidine kinase.
       0.731
ADL46706.1
TIGRFAM: DNA binding domain protein, excisionase family; KEGG: sro:Sros_3544 phage excisionase.
       0.531
ADL46707.1
KEGG: tcu:Tcur_4090 alpha/beta hydrolase.
       0.513
Your Current Organism:
Micromonospora aurantiaca
NCBI taxonomy Id: 644283
Other names: M. aurantiaca ATCC 27029, Micromonospora aurantiaca ATCC 27029, Micromonospora aurantiaca str. ATCC 27029, Micromonospora aurantiaca strain ATCC 27029
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.