STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL46766.1PFAM: Polysulphide reductase NrfD; KEGG: kra:Krad_1604 polysulphide reductase NrfD. (393 aa)    
Predicted Functional Partners:
ADL46767.1
KEGG: svi:Svir_19180 formate dehydrogenase beta subunit.
 
  
 0.976
ADL46768.1
Manually curated; TIGRFAM: formate dehydrogenase, alpha subunit; Contains selenocysteine; KEGG: svi:Svir_19190 formate dehydrogenase, alpha subunit; PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; molydopterin dinucleotide-binding region; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
   
 0.967
ADL46764.1
KEGG: sro:Sros_3739 selenocysteine-specific translation elongation factor; TIGRFAM: selenocysteine-specific translation elongation factor; PFAM: protein synthesis factor GTP-binding; Elongation factor SelB winged helix 3; elongation factor Tu domain 2 protein.
 
   
 0.897
selA-2
L-seryl-tRNA selenium transferase; Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis.
 
   
 0.844
selD
Selenide, water dikinase; Synthesizes selenophosphate from selenide and ATP.
 
   
 0.718
selA
L-seryl-tRNA(Sec) selenium transferase; Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis.
 
   
 0.687
ADL45483.1
TIGRFAM: regulatory protein, FmdB family; PFAM: Putative regulatory protein FmdB; KEGG: svi:Svir_19690 putative regulatory protein, FmdB family; SMART: Putative regulatory protein FmdB.
 
     0.406
ADL46769.1
KEGG: saq:Sare_3211 hypothetical protein.
       0.406
ADL46763.1
KEGG: saq:Sare_2530 hypothetical protein.
       0.405
Your Current Organism:
Micromonospora aurantiaca
NCBI taxonomy Id: 644283
Other names: M. aurantiaca ATCC 27029, Micromonospora aurantiaca ATCC 27029, Micromonospora aurantiaca str. ATCC 27029, Micromonospora aurantiaca strain ATCC 27029
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.