STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL46768.1Manually curated; TIGRFAM: formate dehydrogenase, alpha subunit; Contains selenocysteine; KEGG: svi:Svir_19190 formate dehydrogenase, alpha subunit; PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; molydopterin dinucleotide-binding region; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (1107 aa)    
Predicted Functional Partners:
ADL46767.1
KEGG: svi:Svir_19180 formate dehydrogenase beta subunit.
 
 0.999
ADL46766.1
PFAM: Polysulphide reductase NrfD; KEGG: kra:Krad_1604 polysulphide reductase NrfD.
 
   
 0.967
ADL43966.1
KEGG: saq:Sare_4459 NADH dehydrogenase subunit E; TIGRFAM: NADH-quinone oxidoreductase, E subunit; PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit.
  
 
 0.954
ADL45526.1
KEGG: bcv:Bcav_0158 hypothetical protein.
  
 
 0.950
ADL46764.1
KEGG: sro:Sros_3739 selenocysteine-specific translation elongation factor; TIGRFAM: selenocysteine-specific translation elongation factor; PFAM: protein synthesis factor GTP-binding; Elongation factor SelB winged helix 3; elongation factor Tu domain 2 protein.
 
   
 0.939
ADL48077.1
PFAM: cytochrome c class I; KEGG: saq:Sare_3526 cytochrome c class I.
  
 
 0.933
tuf
Translation elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
   
 
 0.931
selA-2
L-seryl-tRNA selenium transferase; Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis.
 
   
 0.922
ADL45482.1
Formamidase; KEGG: rha:RHA1_ro02124 formamidase; PFAM: Acetamidase/Formamidase.
  
  
 0.919
ADL44217.1
PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: stp:Strop_0699 pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein.
  
  
 0.909
Your Current Organism:
Micromonospora aurantiaca
NCBI taxonomy Id: 644283
Other names: M. aurantiaca ATCC 27029, Micromonospora aurantiaca ATCC 27029, Micromonospora aurantiaca str. ATCC 27029, Micromonospora aurantiaca strain ATCC 27029
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