STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL46793.1PFAM: regulatory protein TetR; KEGG: saq:Sare_2546 TetR family transcriptional regulator. (226 aa)    
Predicted Functional Partners:
ADL46792.1
PFAM: Flavin-containing monooxygenase-like; KEGG: saq:Sare_2545 FAD dependent oxidoreductase.
 
   
 0.630
ADL46788.1
PFAM: major facilitator superfamily MFS_1; KEGG: gob:Gobs_2149 major facilitator superfamily MFS_1.
       0.539
ADL46789.1
GntR domain protein; KEGG: kfl:Kfla_6863 transcriptional regulator, GntR family; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH.
     
 0.539
ADL46790.1
PFAM: alpha/beta hydrolase fold; KEGG: cmi:CMM_2872 putative hydrolase/acyltransferase.
       0.539
ADL46791.1
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: stp:Strop_2396 short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
       0.539
Your Current Organism:
Micromonospora aurantiaca
NCBI taxonomy Id: 644283
Other names: M. aurantiaca ATCC 27029, Micromonospora aurantiaca ATCC 27029, Micromonospora aurantiaca str. ATCC 27029, Micromonospora aurantiaca strain ATCC 27029
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