STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL46813.1PFAM: Lycopene beta and epsilon cyclase; KEGG: stp:Strop_2408 lycopene beta and epsilon cyclase. (400 aa)    
Predicted Functional Partners:
ADL43811.1
KEGG: stp:Strop_4439 phytoene dehydrogenase-related protein; TIGRFAM: phytoene desaturase; PFAM: amine oxidase.
 
 
 0.984
ADL49293.1
PFAM: amine oxidase; KEGG: saq:Sare_0282 amine oxidase.
 
  
 0.969
ADL43813.1
Phytoene synthase; KEGG: saq:Sare_4931 squalene/phytoene synthase; PFAM: Squalene/phytoene synthase.
 
  
 0.787
ADL47419.1
Beta-ketoacyl synthase; KEGG: cai:Caci_2598 KR domain protein; PFAM: Beta-ketoacyl synthase; KR domain protein; Enoyl-CoA hydratase/isomerase; phosphopantetheine-binding; Methyltransferase type 12; aromatic amino acid beta-eliminating lyase/threonine aldolase; alpha/beta hydrolase fold; SMART: Polyketide synthase, beta-ketoacyl synthase region; Polyketide synthase, phosphopantetheine-binding; Polyketide synthase/Fatty acid synthase, KR.
  
 
 0.735
ADL48016.1
KEGG: stp:Strop_3248 phytoene dehydrogenase-related protein; TIGRFAM: phytoene desaturase; PFAM: amine oxidase.
 
  
 0.682
ADL46814.1
PFAM: major facilitator superfamily MFS_1; KEGG: stp:Strop_2409 major facilitator transporter.
       0.678
ADL46815.1
KEGG: fre:Franean1_4326 RNA polymerase ECF-subfamily sigma factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2.
       0.564
ADL46816.1
PFAM: YCII-related; KEGG: sma:SAV_960 hypothetical protein.
       0.564
ADL44815.1
KEGG: saq:Sare_1103 electron transfer flavoprotein alpha/beta-subunit; PFAM: Electron transfer flavoprotein alpha/beta-subunit; SMART: Electron transfer flavoprotein alpha/beta-subunit.
  
 
 0.551
ADL47039.1
KEGG: stp:Strop_2512 hypothetical protein.
  
     0.502
Your Current Organism:
Micromonospora aurantiaca
NCBI taxonomy Id: 644283
Other names: M. aurantiaca ATCC 27029, Micromonospora aurantiaca ATCC 27029, Micromonospora aurantiaca str. ATCC 27029, Micromonospora aurantiaca strain ATCC 27029
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