STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL46814.1PFAM: major facilitator superfamily MFS_1; KEGG: stp:Strop_2409 major facilitator transporter. (415 aa)    
Predicted Functional Partners:
ADL46813.1
PFAM: Lycopene beta and epsilon cyclase; KEGG: stp:Strop_2408 lycopene beta and epsilon cyclase.
       0.678
ADL43944.1
PFAM: protein of unknown function DUF894 DitE; KEGG: sna:Snas_1226 major facilitator superfamily MFS_1.
  
     0.646
ADL46815.1
KEGG: fre:Franean1_4326 RNA polymerase ECF-subfamily sigma factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2.
       0.639
ADL46816.1
PFAM: YCII-related; KEGG: sma:SAV_960 hypothetical protein.
       0.639
ADL44076.1
PFAM: major facilitator superfamily MFS_1; KEGG: saq:Sare_0506 major facilitator transporter.
  
     0.607
ADL48797.1
PFAM: major facilitator superfamily MFS_1; KEGG: stp:Strop_3741 major facilitator transporter.
  
     0.581
ADL48432.1
PFAM: GCN5-related N-acetyltransferase; KEGG: saq:Sare_3887 hypothetical protein.
   
    0.434
Your Current Organism:
Micromonospora aurantiaca
NCBI taxonomy Id: 644283
Other names: M. aurantiaca ATCC 27029, Micromonospora aurantiaca ATCC 27029, Micromonospora aurantiaca str. ATCC 27029, Micromonospora aurantiaca strain ATCC 27029
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.