STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL46816.1PFAM: YCII-related; KEGG: sma:SAV_960 hypothetical protein. (135 aa)    
Predicted Functional Partners:
ADL46815.1
KEGG: fre:Franean1_4326 RNA polymerase ECF-subfamily sigma factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2.
 
     0.951
ADL46814.1
PFAM: major facilitator superfamily MFS_1; KEGG: stp:Strop_2409 major facilitator transporter.
       0.639
ADL44151.1
KEGG: cwo:Cwoe_3324 putative RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2.
 
     0.612
ADL46716.1
PFAM: Sigma-70 region 4 type 2; KEGG: bcv:Bcav_0382 putative RNA polymerase, sigma-24 subunit, ECF subfamily.
 
     0.593
ADL46813.1
PFAM: Lycopene beta and epsilon cyclase; KEGG: stp:Strop_2408 lycopene beta and epsilon cyclase.
       0.564
ADL47101.1
KEGG: cwo:Cwoe_2465 putative RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2.
 
     0.524
ADL49456.1
KEGG: kfl:Kfla_2784 putative RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2.
 
     0.495
ADL47102.1
PFAM: YCII-related; KEGG: sma:SAV_1196 hypothetical protein.
  
     0.472
ADL45573.1
KEGG: fre:Franean1_4939 RNA polymerase factor sigma-70; TIGRFAM: RNA polymerase sigma-70 factor; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; Belongs to the sigma-70 factor family. ECF subfamily.
  
     0.450
ADL46817.1
KEGG: sro:Sros_4217 hypothetical protein.
       0.445
Your Current Organism:
Micromonospora aurantiaca
NCBI taxonomy Id: 644283
Other names: M. aurantiaca ATCC 27029, Micromonospora aurantiaca ATCC 27029, Micromonospora aurantiaca str. ATCC 27029, Micromonospora aurantiaca strain ATCC 27029
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.