STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL46835.1KEGG: peptidase S45 penicillin amidase; PFAM: peptidase S45 penicillin amidase; coagulation factor 5/8 type domain protein; SMART: coagulation factor 5/8 type domain protein. (1061 aa)    
Predicted Functional Partners:
ADL46159.1
PFAM: condensation domain protein; KEGG: xal:XALc_1056 probable non-ribosomal peptide synthetase protein.
  
  
 0.629
dinB
DNA-directed DNA polymerase; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII.
       0.529
ADL49458.1
Putative DNA-binding protein; Manually curated; KEGG: fra:Francci3_2889 putative DNA-binding protein.
  
     0.520
ADL47413.1
KEGG: hau:Haur_4021 hypothetical protein.
  
   
 0.507
ADL47540.1
PFAM: phosphopantetheine-binding; KEGG: sco:SCO5089 actinorhodin polyketide synthase acyl carrier protein.
  
    0.493
ADL47609.1
KEGG: GCN5-related N-acetyltransferase.
  
     0.482
ADL46519.1
KEGG: sro:Sros_7012 hypothetical protein.
  
     0.454
ADL47534.1
PFAM: Polyketide cyclase/dehydrase; cyclase/dehydrase; KEGG: tfu:Tfu_1222 actinorhodin polyketide synthase bifunctional cyclase/dehydratase.
  
     0.453
ADL44159.1
KEGG: anti-sigma-factor antagonist; TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS.
  
     0.451
ADL46525.1
KEGG: cai:Caci_1605 coagulation factor 5/8 type domain protein; PFAM: coagulation factor 5/8 type domain protein; SMART: coagulation factor 5/8 type domain protein; Parallel beta-helix repeat.
  
     0.436
Your Current Organism:
Micromonospora aurantiaca
NCBI taxonomy Id: 644283
Other names: M. aurantiaca ATCC 27029, Micromonospora aurantiaca ATCC 27029, Micromonospora aurantiaca str. ATCC 27029, Micromonospora aurantiaca strain ATCC 27029
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.