STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL46846.1KEGG: permease component of ABC-type sugar transporter. (567 aa)    
Predicted Functional Partners:
ADL44335.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: tfu:Tfu_0830 multiple sugar transport system permease protein.
  
 
 0.643
ADL46847.1
KEGG: gau:GAU_3908 hypothetical protein.
       0.620
ADL47502.1
KEGG: bcv:Bcav_2704 hypothetical protein.
  
    0.618
ADL46848.1
KEGG: fre:Franean1_4022 hypothetical protein.
       0.604
ADL46849.1
KEGG: xce:Xcel_3210 hypothetical protein.
       0.599
ADL44624.1
Regulatory protein ArsR; KEGG: sna:Snas_0870 transcriptional regulator, ArsR family; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR.
  
     0.583
ADL46310.1
PFAM: extracellular solute-binding protein family 1; KEGG: kfl:Kfla_4873 extracellular solute-binding protein family 1.
  
   0.573
ADL44333.1
PFAM: extracellular solute-binding protein family 1; KEGG: tfu:Tfu_0832 multiple sugar transport system substrate-binding protein.
  
 
 0.560
ADL49133.1
PFAM: extracellular solute-binding protein family 1; KEGG: sna:Snas_0203 extracellular solute-binding protein family 1.
  
 
 0.560
ADL44096.1
KEGG: stp:Strop_0435 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
  
 
 0.555
Your Current Organism:
Micromonospora aurantiaca
NCBI taxonomy Id: 644283
Other names: M. aurantiaca ATCC 27029, Micromonospora aurantiaca ATCC 27029, Micromonospora aurantiaca str. ATCC 27029, Micromonospora aurantiaca strain ATCC 27029
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