STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL46848.1KEGG: fre:Franean1_4022 hypothetical protein. (180 aa)    
Predicted Functional Partners:
ADL46849.1
KEGG: xce:Xcel_3210 hypothetical protein.
       0.795
ADL46847.1
KEGG: gau:GAU_3908 hypothetical protein.
       0.770
ADL46850.1
Regulatory protein LuxR; KEGG: kfl:Kfla_1331 transcriptional regulator, LuxR family; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; AAA ATPase.
       0.613
ADL46846.1
KEGG: permease component of ABC-type sugar transporter.
       0.604
ADL46845.1
PFAM: diacylglycerol kinase catalytic region; KEGG: gob:Gobs_1398 diacylglycerol kinase catalytic region.
       0.434
Your Current Organism:
Micromonospora aurantiaca
NCBI taxonomy Id: 644283
Other names: M. aurantiaca ATCC 27029, Micromonospora aurantiaca ATCC 27029, Micromonospora aurantiaca str. ATCC 27029, Micromonospora aurantiaca strain ATCC 27029
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.