Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ADL45538.1 | ADL46871.1 | Micau_1990 | Micau_3343 | KEGG: kfl:Kfla_4936 hypothetical protein. | KEGG: ami:Amir_6183 hypothetical protein. | 0.413 |
ADL46871.1 | ADL45538.1 | Micau_3343 | Micau_1990 | KEGG: ami:Amir_6183 hypothetical protein. | KEGG: kfl:Kfla_4936 hypothetical protein. | 0.413 |
ADL46871.1 | ADL46872.1 | Micau_3343 | Micau_3344 | KEGG: ami:Amir_6183 hypothetical protein. | PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bpy:Bphyt_0224 short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.631 |
ADL46871.1 | ADL46954.1 | Micau_3343 | Micau_3426 | KEGG: ami:Amir_6183 hypothetical protein. | PFAM: glycoside hydrolase family 43; KEGG: kfl:Kfla_0049 glycoside hydrolase family 43. | 0.634 |
ADL46871.1 | ADL47333.1 | Micau_3343 | Micau_3809 | KEGG: ami:Amir_6183 hypothetical protein. | PFAM: Methyltransferase type 12; KEGG: kfl:Kfla_0509 hypothetical protein. | 0.403 |
ADL46872.1 | ADL46871.1 | Micau_3344 | Micau_3343 | PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bpy:Bphyt_0224 short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | KEGG: ami:Amir_6183 hypothetical protein. | 0.631 |
ADL46954.1 | ADL46871.1 | Micau_3426 | Micau_3343 | PFAM: glycoside hydrolase family 43; KEGG: kfl:Kfla_0049 glycoside hydrolase family 43. | KEGG: ami:Amir_6183 hypothetical protein. | 0.634 |
ADL47333.1 | ADL46871.1 | Micau_3809 | Micau_3343 | PFAM: Methyltransferase type 12; KEGG: kfl:Kfla_0509 hypothetical protein. | KEGG: ami:Amir_6183 hypothetical protein. | 0.403 |